Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NAA5_GASACZgc:101559. (233 aa)    
Predicted Functional Partners:
G3N943_GASAC
ATG16 autophagy related 16-like 1 (S. cerevisiae).
    
 0.971
G3Q7G7_GASAC
RAB33B, member RAS oncogene family a.
  
  
 
0.902
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.824
G3PW35_GASAC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.820
G3PZ97_GASAC
USO1 vesicle transport factor.
   
 0.817
G3PXV3_GASAC
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.813
G3NBR3_GASAC
Trafficking protein particle complex 8.
    
 0.811
G3N849_GASAC
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.806
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.804
G3NUK4_GASAC
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.802
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.