STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NAG5_GASACDEAH (Asp-Glu-Ala-His) box polypeptide 16. (1051 aa)    
Predicted Functional Partners:
G3PEN4_GASAC
G patch domain and KOW motifs.
   
 0.996
G3PC73_GASAC
Small nuclear ribonucleoprotein 200 (U5).
  
 
 0.995
G3PDD4_GASAC
CDC5 cell division cycle 5-like (S. pombe).
 
 
 0.995
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
   
 0.995
G3P105_GASAC
Pre-mRNA processing factor 8.
   
 
 0.994
G3P6H9_GASAC
XPA binding protein 2.
   
 0.994
G3PCH6_GASAC
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.991
G3P5L1_GASAC
Ring finger protein 113A.
    
 0.989
G3NBJ7_GASAC
CWC22 spliceosome associated protein homolog.
   
 0.985
G3NDR5_GASAC
Splicing factor 3b, subunit 3.
   
 0.985
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.