STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NAJ5_GASACCLN5 intracellular trafficking protein. (326 aa)    
Predicted Functional Partners:
G3PXR6_GASAC
CLN6 transmembrane ER protein a.
  
   
 0.704
G3NPE0_GASAC
Battenin.
    
 
 0.674
G3NDR8_GASAC
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
   
  
 0.593
G3NUD9_GASAC
CLN8 transmembrane ER and ERGIC protein.
      
 0.592
G3Q747_GASAC
Major facilitator superfamily domain containing 8.
      
 0.563
G3P134_GASAC
Tripeptidyl peptidase I.
   
  
 0.522
G3PI00_GASAC
ShKT domain-containing protein; Belongs to the CRISP family.
      
 0.473
G3Q496_GASAC
Cathepsin F; Belongs to the peptidase C1 family.
      
 0.472
G3P5G1_GASAC
Arylsulfatase G.
    
 
 0.451
G3PXA6_GASAC
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
   
  
 0.441
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.