STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NAN3_GASACIsopentenyl-diphosphate delta isomerase 1. (259 aa)    
Predicted Functional Partners:
G3PTV2_GASAC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 
 0.983
G3NDL3_GASAC
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.978
G3P7J4_GASAC
Farnesyl-diphosphate farnesyltransferase 1.
 
 
 0.972
G3PDQ2_GASAC
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.967
G3Q3W0_GASAC
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
  
 0.961
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.951
G3NJZ5_GASAC
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.945
G3NJG1_GASAC
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
  
  
 0.944
G3PDM9_GASAC
SH3 domain-containing protein.
  
 
 0.944
G3Q0Q2_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 
 0.943
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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