STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE3-3Copine III. (236 aa)    
Predicted Functional Partners:
CPNE3-2
Copine domain-containing protein.
 
     0.946
G3NEE6_GASAC
Ribonuclease H2, subunit B.
   
 
 0.669
G3PU55_GASAC
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.629
G3Q5X0_GASAC
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.586
G3N7W0_GASAC
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.527
G3N996_GASAC
SAC domain-containing protein.
     
 0.524
G3NFV1_GASAC
PIK helical domain-containing protein.
     
 0.524
G3NK63_GASAC
SAC1 like phosphatidylinositide phosphatase b.
     
 0.524
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
     
 0.524
MTMR4
Myotubularin related protein 4.
   
 
 0.523
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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