STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NB05_GASACTransmembrane O-mannosyltransferase targeting cadherins 4. (741 aa)    
Predicted Functional Partners:
G3PQA7_GASAC
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.937
G3PLY3_GASAC
Integrator complex subunit 1.
    
 0.923
G3Q4S0_GASAC
Integrator complex subunit 13.
   
 0.914
G3Q043_GASAC
Integrator complex subunit 5.
    
 0.902
G3P7V6_GASAC
Integrator complex subunit 3.
    
 0.901
G3Q1H5_GASAC
Integrator complex subunit 10.
   
 0.892
G3PC67_GASAC
Uncharacterized protein.
   
 0.872
G3PC70_GASAC
Uncharacterized protein.
   
 0.872
G3PC74_GASAC
Uncharacterized protein.
   
 0.872
G3NMB7_GASAC
Integrator complex subunit 9.
  
 0.855
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.