STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB39BRAB39B, member RAS oncogene family. (215 aa)    
Predicted Functional Partners:
G3PBC3_GASAC
Intersectin 2a.
    
 0.906
G3PUV9_GASAC
Intersectin 2b.
    
 0.906
G3PT71_GASAC
WD repeat domain 41.
    
 0.889
G3NY61_GASAC
Smith-Magenis syndrome chromosome region, candidate 8a.
    
 0.879
G3NYB3_GASAC
RAB42, member RAS oncogene family a.
  
 
0.878
G3PWE2_GASAC
Smith-Magenis syndrome chromosome region, candidate 8b.
    
 0.878
G3NPV4_GASAC
Zgc:100846.
    
  0.875
G3PBG4_GASAC
Intersectin 1 (SH3 domain protein).
    
 0.862
G3PV31_GASAC
Sequestosome 1.
   
 
  0.843
G3Q4V9_GASAC
Gamma-secretase activating protein.
   
 
  0.843
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.