Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NB45_GASACZgc:162171. (221 aa)    
Predicted Functional Partners:
G3NAQ1_GASAC
Rab geranylgeranyltransferase subunit alpha.
    
 0.765
G3QCN1_GASAC
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.756
G3PKG3_GASAC
Cyclin G associated kinase.
    
 
 0.742
G3PGF7_GASAC
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
    
 0.687
G3NN37_GASAC
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.632
G3NXA1_GASAC
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
    
 0.612
G3P154_GASAC
ANK_REP_REGION domain-containing protein.
    
 
 0.596
G3P162_GASAC
Ankyrin repeat domain 27 (VPS9 domain).
    
 
 0.596
G3N8B8_GASAC
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.553
G3P8V9_GASAC
Rhotekin 2a.
      
 0.553
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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