STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NB60_GASACPOU domain protein. (436 aa)    
Predicted Functional Partners:
G3NU10_GASAC
Sp1 transcription factor.
    
 0.759
G3P5N1_GASAC
Zinc finger protein 143b.
   
  0.698
G3PSY4_GASAC
General transcription factor IIB.
    
 0.697
G3NM42_GASAC
E1A binding protein p300 a.
    
 0.689
G3NY16_GASAC
E1A binding protein p300 b.
    
 0.689
G3NWX0_GASAC
General transcription factor IIE, polypeptide 1, alpha.
    
  0.671
G3PZG5_GASAC
Small nuclear RNA activating complex, polypeptide 3.
   
 
  0.654
G3NNK1_GASAC
General transcription factor IIA, 1.
   
 
  0.649
G3QAU1_GASAC
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
  0.647
G3PGP0_GASAC
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 
 0.643
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.