STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NB77_GASACLeucine-rich repeat, immunoglobulin-like and transmembrane domains 3b. (284 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.957
G3PX11_GASAC
Vav 3 guanine nucleotide exchange factor b.
    
 0.909
G3Q9X3_GASAC
Receptor-interacting serine-threonine kinase 4.
   
 0.868
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.866
G3NHR1_GASAC
Uncharacterized protein.
    
 0.847
G3NTF8_GASAC
Hyaluronan binding protein 2.
    
 0.847
HGFAC
HGF activator.
    
 0.847
G3P3G3_GASAC
MET proto-oncogene, receptor tyrosine kinase.
   
 0.832
G3P8P8_GASAC
Macrophage stimulating 1 receptor a.
   
 0.832
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
   
 0.832
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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