STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NB79_GASACUncharacterized protein. (271 aa)    
Predicted Functional Partners:
G3NGT7_GASAC
Ataxin 1a.
    
 
 0.878
G3P1S6_GASAC
Ataxin 1b.
    
 
 0.878
G3PQQ7_GASAC
AXH domain-containing protein.
    
 
 0.878
G3Q648_GASAC
RNA binding motif protein 17.
      
 0.546
G3P0A5_GASAC
Parvalbumin 6; Belongs to the parvalbumin family.
    
 
 0.446
G3Q3C4_GASAC
Ribosomal protein L26.
    
   0.423
G3Q4C1_GASAC
Uncharacterized protein.
  
     0.423
G3NM39_GASAC
Uncharacterized protein.
    
 
 0.416
G3NNJ1_GASAC
TLE family member 3, transcriptional corepressor.
    
 
 0.416
TLE4
Uncharacterized protein.
    
 
 0.416
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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