STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NB83_GASACZgc:91910. (76 aa)    
Predicted Functional Partners:
G3P9W7_GASAC
WD_REPEATS_REGION domain-containing protein.
      
 0.517
G3NR91_GASAC
Actin binding transcription modulator.
   
  
 0.452
G3NCG6_GASAC
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
    
   0.450
G3NLH4_GASAC
Ubiquitin protein ligase E3 component n-recognin 5.
      
 0.449
G3P6T4_GASAC
Coiled-coil domain containing 181.
      
 0.438
G3P837_GASAC
Nt_Gln_amidase domain-containing protein.
      
 0.436
G3NL95_GASAC
Antizyme inhibitor 1a; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
  
 0.434
G3NNE8_GASAC
Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
  
 0.434
G3NQG7_GASAC
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
  
 0.406
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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