Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NBB1_GASACRBR-type E3 ubiquitin transferase. (586 aa)    
Predicted Functional Partners:
G3QA52_GASAC
Ubiquitin B.
    
 0.835
G3N5F0_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.773
G3NYQ3_GASAC
Ring finger protein 216.
    
 0.758
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.753
G3N8Y0_GASAC
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.737
G3PEA2_GASAC
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.737
G3PES0_GASAC
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.737
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
    
 0.718
G3NG66_GASAC
Uncharacterized protein.
    
   0.703
G3P981_GASAC
DIRAS family, GTP-binding RAS-like 1b.
    
   0.703
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.