STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NBK1_GASACHistone H2B; Belongs to the histone H2B family. (132 aa)    
Predicted Functional Partners:
G3PQA7_GASAC
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.896
G3Q8U9_GASAC
Lysine (K)-specific demethylase 6B, a.
   
 0.832
G3P3W5_GASAC
Lysine (K)-specific demethylase 6A.
    
 0.828
G3PQJ0_GASAC
Lysine (K)-specific demethylase 6A, like.
    
 0.828
G3QAD8_GASAC
JmjC domain-containing protein.
    
 0.828
G3PSY3_GASAC
CTR9 homolog, Paf1/RNA polymerase II complex component.
 
  
 0.820
G3PNT4_GASAC
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
 0.807
G3PNW6_GASAC
Histone H2A; Belongs to the histone H2A family.
   
 0.803
G3N752_GASAC
Histone H2A; Belongs to the histone H2A family.
   
 0.802
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.802
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.