G3NBQ9_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3NBQ9_GASAC

Protein kinase domain-containing protein. (358 aa)

Predicted Functional Partners:

G3N6H3_GASAC

0.931

G3P2J3_GASAC

0.931

G3NZN3_GASAC

0.926

G3NN97_GASAC

0.923

G3PXR1_GASAC

0.923

G3NEC5_GASAC

0.913

PRKCE

0.913

G3N515_GASAC

0.772

G3PG48_GASAC

0.771

G3PFB8_GASAC

0.768

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N515_GASAC	G3N6H3_GASAC	ENSGACP00000000385	ENSGACP00000000898	Uncharacterized protein.	Uncharacterized protein.	0.521
G3N515_GASAC	G3NBQ9_GASAC	ENSGACP00000000385	ENSGACP00000002756	Uncharacterized protein.	Protein kinase domain-containing protein.	0.772
G3N515_GASAC	G3NN97_GASAC	ENSGACP00000000385	ENSGACP00000006811	Uncharacterized protein.	Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.553
G3N515_GASAC	G3NZN3_GASAC	ENSGACP00000000385	ENSGACP00000010806	Uncharacterized protein.	Myosin, light chain 9a, regulatory.	0.477
G3N6H3_GASAC	G3N515_GASAC	ENSGACP00000000898	ENSGACP00000000385	Uncharacterized protein.	Uncharacterized protein.	0.521
G3N6H3_GASAC	G3NBQ9_GASAC	ENSGACP00000000898	ENSGACP00000002756	Uncharacterized protein.	Protein kinase domain-containing protein.	0.931
G3N6H3_GASAC	G3NZN3_GASAC	ENSGACP00000000898	ENSGACP00000010806	Uncharacterized protein.	Myosin, light chain 9a, regulatory.	0.981
G3N6H3_GASAC	G3P2J3_GASAC	ENSGACP00000000898	ENSGACP00000011816	Uncharacterized protein.	Zgc:153867.	0.949
G3NBQ9_GASAC	G3N515_GASAC	ENSGACP00000002756	ENSGACP00000000385	Protein kinase domain-containing protein.	Uncharacterized protein.	0.772
G3NBQ9_GASAC	G3N6H3_GASAC	ENSGACP00000002756	ENSGACP00000000898	Protein kinase domain-containing protein.	Uncharacterized protein.	0.931
G3NBQ9_GASAC	G3NEC5_GASAC	ENSGACP00000002756	ENSGACP00000003676	Protein kinase domain-containing protein.	Protein kinase C.	0.913
G3NBQ9_GASAC	G3NN97_GASAC	ENSGACP00000002756	ENSGACP00000006811	Protein kinase domain-containing protein.	Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.923
G3NBQ9_GASAC	G3NZN3_GASAC	ENSGACP00000002756	ENSGACP00000010806	Protein kinase domain-containing protein.	Myosin, light chain 9a, regulatory.	0.926
G3NBQ9_GASAC	G3P2J3_GASAC	ENSGACP00000002756	ENSGACP00000011816	Protein kinase domain-containing protein.	Zgc:153867.	0.931
G3NBQ9_GASAC	G3PFB8_GASAC	ENSGACP00000002756	ENSGACP00000016292	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.768
G3NBQ9_GASAC	G3PG48_GASAC	ENSGACP00000002756	ENSGACP00000016572	Protein kinase domain-containing protein.	P21 protein (Cdc42/Rac)-activated kinase 7.	0.771
G3NBQ9_GASAC	G3PXR1_GASAC	ENSGACP00000002756	ENSGACP00000022400	Protein kinase domain-containing protein.	Calmodulin-like 4a.	0.923
G3NBQ9_GASAC	PRKCE	ENSGACP00000002756	ENSGACP00000015083	Protein kinase domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.913
G3NEC5_GASAC	G3NBQ9_GASAC	ENSGACP00000003676	ENSGACP00000002756	Protein kinase C.	Protein kinase domain-containing protein.	0.913
G3NEC5_GASAC	G3NN97_GASAC	ENSGACP00000003676	ENSGACP00000006811	Protein kinase C.	Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.444