Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NBT1_GASACZnMc domain-containing protein. (607 aa)    
Predicted Functional Partners:
G3NF90_GASAC
TIMP metallopeptidase inhibitor 2a.
   
 0.757
G3PAJ5_GASAC
TIMP metallopeptidase inhibitor 2b.
   
 0.757
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.749
G3PJL8_GASAC
Cathepsin K; Belongs to the peptidase C1 family.
   
 0.710
G3NGY6_GASAC
V-set immunoregulatory receptor.
      
 0.701
G3PC60_GASAC
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
 0.691
G3PTS1_GASAC
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
 0.691
G3NWR5_GASAC
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.669
G3PBZ4_GASAC
Link domain-containing protein.
    
 0.606
G3PWM8_GASAC
Matrix metallopeptidase 2.
   
 0.597
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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