STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NBU3_GASACOligodendrocyte lineage transcription factor 2. (271 aa)    
Predicted Functional Partners:
G3NV97_GASAC
NK2 homeobox 2a.
   
 0.719
G3NWH9_GASAC
SRY-box transcription factor 10.
   
 
 0.629
G3NHL7_GASAC
Inhibitor of DNA binding 4.
    
 
 0.604
G3P5T5_GASAC
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.529
TCF4
Transcription factor 4.
    
 
 0.493
G3NRW4_GASAC
BHLH domain-containing protein.
    
 
 0.493
G3PGW1_GASAC
Transcription factor 3b.
    
 
 0.493
G3PRC8_GASAC
Transcription factor 3a.
    
 
 0.493
G3PTF9_GASAC
Transcription factor 12.
    
 
 0.493
G3NZZ8_GASAC
Noggin; Belongs to the noggin family.
      
 0.487
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.