STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NBU4_GASACTransmembrane protein 231. (310 aa)    
Predicted Functional Partners:
G3NVD1_GASAC
B9 domain containing 2.
   
 
 0.895
G3PGQ9_GASAC
B9 protein domain 1.
   
 
 0.865
G3N7K4_GASAC
DUF1619 domain-containing protein.
   
 
 0.720
G3QC31_GASAC
MKS transition zone complex subunit 1.
    
 
 0.709
G3P1K2_GASAC
Uncharacterized protein.
    
 
 0.685
G3P317_GASAC
Transmembrane protein 67.
   
  
 0.640
G3NWY6_GASAC
DUF1619 domain-containing protein.
   
 
 0.638
TMEM107
Transmembrane protein 107 like.
   
 
 0.632
TMEM216
Transmembrane protein 216.
   
  
 0.602
G3NPL7_GASAC
Uncharacterized protein.
      
 0.592
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.