STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NBY6_GASACAdenosine deaminase tRNA specific 1. (451 aa)    
Predicted Functional Partners:
G3NDR1_GASAC
Adenosine deaminase tRNA specific 3.
      
 0.592
G3PE33_GASAC
CMP/dCMP-type deaminase domain-containing protein.
      
 0.591
G3PT52_GASAC
Lysine--tRNA ligase.
 
    
 0.567
G3NJG9_GASAC
Potassium channel tetramerization domain containing 2.
    
   0.550
G3NZ66_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.550
G3P2F4_GASAC
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.550
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
    
 
 0.546
G3Q3Q9_GASAC
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
  
 0.495
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.471
G3Q614_GASAC
Thioredoxin; Belongs to the thioredoxin family.
    
   0.471
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.