STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NBZ2_GASACCyclin T2; Belongs to the cyclin family. (649 aa)    
Predicted Functional Partners:
G3Q3M8_GASAC
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
   
 0.977
G3NMM4_GASAC
Cyclin-dependent kinase 13.
   
 0.957
G3QBZ7_GASAC
AF4/FMR2 family, member 4.
   
 0.957
G3PVC9_GASAC
Uncharacterized protein.
   
 0.904
G3NMH3_GASAC
Transcription elongation factor SPT5.
   
 0.846
G3NEU4_GASAC
Negative elongation factor complex member E.
    
 0.824
G3Q7S8_GASAC
La ribonucleoprotein domain family, member 7.
   
 0.814
G3QA22_GASAC
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.814
G3Q6T9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.801
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.798
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.