Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSNK1DCasein kinase 1 delta; Belongs to the protein kinase superfamily. (408 aa)    
Predicted Functional Partners:
G3Q8A0_GASAC
LTV1 ribosome biogenesis factor.
    
 0.935
G3P5K4_GASAC
RIO kinase 2 (yeast).
   
 0.933
G3N7T4_GASAC
Bystin-like.
    
 0.930
G3NJ56_GASAC
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
  0.929
G3Q821_GASAC
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.922
G3P9S3_GASAC
TSR1 ribosome maturation factor.
    
 0.917
G3Q005_GASAC
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.916
G3NP65_GASAC
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
  
  
 
0.900
G3Q1D2_GASAC
F-box and WD repeat domain containing 11a.
   
 0.889
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
   
 0.884
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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