Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NC42_GASACSi:ch1073-513e17.1. (491 aa)    
Predicted Functional Partners:
G3PEH3_GASAC
Solute carrier family 17 member 5.
  
  
 
0.903
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.704
G3NZY5_GASAC
Uncharacterized protein.
      
 0.633
G3N557_GASAC
BRCA1 associated protein.
      
 0.618
G3P9M6_GASAC
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
     
 0.593
G3PEG1_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.
    
 
 0.585
G3NL46_GASAC
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.582
G3PPA3_GASAC
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.582
HECTD4
HECT domain E3 ubiquitin protein ligase 4.
    
 
 0.572
G3PBF3_GASAC
Uncharacterized protein.
    
 
 0.572
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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