Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NC48_GASACSerine and arginine rich splicing factor 10. (234 aa)    
Predicted Functional Partners:
G3PAP2_GASAC
Uncharacterized protein.
   
 0.968
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.968
G3NRE8_GASAC
Transformer 2 beta homolog.
   
 0.919
G3NUV9_GASAC
Transformer 2 alpha homolog.
   
 0.919
TRA2B
Transformer 2 beta homolog.
   
 0.919
G3Q963_GASAC
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.919
G3P485_GASAC
HEXIM P-TEFb complex subunit 1.
    
 
 0.908
G3P423_GASAC
Serine and arginine rich splicing factor 11.
   
 0.901
G3PTF5_GASAC
Uncharacterized protein.
   
 0.901
G3Q144_GASAC
RRM domain-containing protein.
   
 0.901
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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