Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NC50_GASACRAB3 GTPase activating protein subunit 1. (964 aa)    
Predicted Functional Partners:
G3PJ36_GASAC
RAB3 GTPase activating protein subunit 2 (non-catalytic).
   
 0.999
DMXL1
Dmx like 1.
   
 
 0.880
G3PWX1_GASAC
Dmx-like 2.
   
 
 0.880
G3NA70_GASAC
RAB18A, member RAS oncogene family.
    
 0.872
G3PVK7_GASAC
RAB18B, member RAS oncogene family.
    
 0.872
WDR7
WD repeat domain 7.
    
 
 0.845
G3QCN1_GASAC
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
 0.817
G3P0V8_GASAC
Solute carrier family 38 member 6.
   
    0.815
G3NPY4_GASAC
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.801
G3PWM0_GASAC
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.801
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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