STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCB5_GASACSi:ch211-196f5.2. (131 aa)    
Predicted Functional Partners:
OSGEP
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. OSGEP likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
   
    0.453
G3NUS2_GASAC
Uncharacterized protein.
   
    0.452
G3PDM6_GASAC
2-epi-5-epi-valiolone synthase.
   
    0.452
G3PXA7_GASAC
Secreted frizzled-related protein 2.
   
    0.452
G3NF18_GASAC
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
    0.451
G3NL40_GASAC
Uncharacterized protein.
   
    0.451
G3NXA5_GASAC
Uncharacterized protein.
   
    0.451
G3P351_GASAC
Cadherin 17, LI cadherin (liver-intestine).
   
    0.451
G3PKN8_GASAC
Tenascin N.
   
    0.451
G3PZD0_GASAC
Uncharacterized protein.
   
    0.451
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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