STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCD9_GASACProgrammed cell death 6. (185 aa)    
Predicted Functional Partners:
G3NPV3_GASAC
Programmed cell death 6 interacting protein.
    
 
 0.839
G3P2I2_GASAC
Uncharacterized protein.
   
 0.838
G3NCV6_GASAC
SEC31 homolog B, COPII coat complex component.
    
 
 0.790
G3PSX0_GASAC
SEC31 homolog A, COPII coat complex component.
    
 
 0.790
G3P6B4_GASAC
Heme-binding protein soul5.
    
   0.708
G3PBN8_GASAC
Heme binding protein 2.
    
   0.708
CAPN2
Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.
   
0.687
G3NLU3_GASAC
Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.
   
0.684
G3NA95_GASAC
Calpain 7; Belongs to the peptidase C2 family.
   
 0.683
G3NML5_GASAC
Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family.
   
0.683
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.