STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCI0_GASACPhosphatase domain containing paladin 1a. (869 aa)    
Predicted Functional Partners:
G3Q0X1_GASAC
Poly [ADP-ribose] polymerase.
      
 0.523
G3NJ42_GASAC
Syntaxin 4; Belongs to the syntaxin family.
      
 0.485
G3NWJ8_GASAC
Polymerase (RNA) II (DNA directed) polypeptide F.
      
 0.485
G3NCH6_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
 
    
 0.469
G3P1Q5_GASAC
Zinc finger protein 646.
      
 0.457
G3PC06_GASAC
LMWPc domain-containing protein.
      
 0.432
G3PBI6_GASAC
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
      
 0.431
G3NHT9_GASAC
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.400
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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