Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NCI5_GASACOrganic solute carrier partner 1a. (378 aa)    
Predicted Functional Partners:
G3P7M0_GASAC
WD repeat domain 54.
   
   0.903
USP16
Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B.
    
   0.669
LSM10
LSM10, U7 small nuclear RNA associated.
   
  
 0.665
G3PKR0_GASAC
Serine/threonine kinase 40.
      
 0.633
G3PYI1_GASAC
THAP-type domain-containing protein.
      
 0.632
G3PPJ1_GASAC
Proteasome 26S subunit, non-ATPase 3.
      
 0.590
G3PKT4_GASAC
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
      
 0.554
G3NHD8_GASAC
Glycogenin 1b.
    
   0.548
G3P9H4_GASAC
Glycogenin 1a.
    
   0.548
G3PR35_GASAC
Glycogenin 2.
    
   0.548
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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