Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NCJ1_GASACLeucine rich repeat containing 20. (170 aa)    
Predicted Functional Partners:
G3N866_GASAC
Uncharacterized protein.
  
   
 0.811
G3P4W4_GASAC
Ankyrin repeat and SOCS box containing 16.
  
 0.757
G3NPD7_GASAC
Ankyrin repeat and SOCS box-containing 12a.
  
 0.755
G3P128_GASAC
Transmembrane protein 38A.
   
 
 0.701
G3PWN1_GASAC
Uncharacterized protein.
  
   
0.687
G3P0J5_GASAC
Ankyrin repeat and SOCS box containing 8.
   
 0.686
G3PW10_GASAC
Ankyrin repeat and SOCS box containing 5a.
   
 0.685
G3Q1H6_GASAC
Ankyrin repeat and SOCS box containing 10.
  
 0.685
G3NPA7_GASAC
Leucine rich repeat containing 14B.
      
 0.681
G3PQD5_GASAC
SLIT and NTRK-like family, member 6.
      
 0.681
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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