STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCJ4_GASACTransmembrane protein 14Ca. (115 aa)    
Predicted Functional Partners:
G3NJJ7_GASAC
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
  
 0.560
G3NLP5_GASAC
Iron-sulfur cluster assembly 1.
      
 0.523
G3PNV0_GASAC
Solute carrier family 25 member 39; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.518
G3Q2L4_GASAC
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
      
 0.516
G3PUQ9_GASAC
ATP-binding cassette, sub-family B (MDR/TAP), member 10.
      
 0.510
G3PZI0_GASAC
Iron-sulfur cluster assembly factor IBA57.
      
 0.508
G3PEK2_GASAC
Cytochrome c oxidase assembly factor COX16.
   
  
 0.506
G3N6B5_GASAC
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.468
G3NJE6_GASAC
Enolase superfamily member 1.
      
 0.465
G3PJV7_GASAC
Diphthamide biosynthesis 5.
      
 0.454
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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