STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCK9_GASACLactate dehydrogenase D. (496 aa)    
Predicted Functional Partners:
G3NMJ1_GASAC
Hydroxyacid oxidase (glycolate oxidase) 1.
 
 0.978
G3Q7Q6_GASAC
Malate synthase-like.
  
 
 0.955
G3NK43_GASAC
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.932
G3NN91_GASAC
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.906
G3PM80_GASAC
Cytochrome b5 reductase 4.
  
 0.897
G3QBS8_GASAC
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.894
G3N7Z2_GASAC
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.893
G3PBH1_GASAC
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.893
G3PS84_GASAC
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.883
G3NFX0_GASAC
Malic enzyme.
  
 
 0.880
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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