G3NCS8_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NCS8_GASAC	G3NUG8_GASAC	ENSGACP00000003128	ENSGACP00000008986	Rhophilin associated tail protein 1-like.	Cilia and flagella associated protein 45.	0.827
G3NCS8_GASAC	G3P356_GASAC	ENSGACP00000003128	ENSGACP00000012029	Rhophilin associated tail protein 1-like.	RIIa domain-containing protein.	0.971
G3NCS8_GASAC	G3P6J0_GASAC	ENSGACP00000003128	ENSGACP00000013213	Rhophilin associated tail protein 1-like.	Radial spoke head 3.	0.893
G3NCS8_GASAC	G3PC67_GASAC	ENSGACP00000003128	ENSGACP00000015191	Rhophilin associated tail protein 1-like.	Uncharacterized protein.	0.910
G3NCS8_GASAC	G3PC70_GASAC	ENSGACP00000003128	ENSGACP00000015194	Rhophilin associated tail protein 1-like.	Uncharacterized protein.	0.910
G3NCS8_GASAC	G3PC74_GASAC	ENSGACP00000003128	ENSGACP00000015198	Rhophilin associated tail protein 1-like.	Uncharacterized protein.	0.910
G3NCS8_GASAC	G3PH97_GASAC	ENSGACP00000003128	ENSGACP00000016972	Rhophilin associated tail protein 1-like.	Ciliogenesis associated TTC17 interacting protein.	0.825
G3NCS8_GASAC	G3PN32_GASAC	ENSGACP00000003128	ENSGACP00000019015	Rhophilin associated tail protein 1-like.	WD repeat domain 78.	0.841
G3NCS8_GASAC	G3Q172_GASAC	ENSGACP00000003128	ENSGACP00000023620	Rhophilin associated tail protein 1-like.	WD_REPEATS_REGION domain-containing protein.	0.857
G3NCS8_GASAC	RSPH1	ENSGACP00000003128	ENSGACP00000002976	Rhophilin associated tail protein 1-like.	Radial spoke head component 1.	0.839
G3NUG8_GASAC	G3NCS8_GASAC	ENSGACP00000008986	ENSGACP00000003128	Cilia and flagella associated protein 45.	Rhophilin associated tail protein 1-like.	0.827
G3NUG8_GASAC	G3P356_GASAC	ENSGACP00000008986	ENSGACP00000012029	Cilia and flagella associated protein 45.	RIIa domain-containing protein.	0.792
G3NUG8_GASAC	G3P6J0_GASAC	ENSGACP00000008986	ENSGACP00000013213	Cilia and flagella associated protein 45.	Radial spoke head 3.	0.932
G3NUG8_GASAC	G3PC67_GASAC	ENSGACP00000008986	ENSGACP00000015191	Cilia and flagella associated protein 45.	Uncharacterized protein.	0.880
G3NUG8_GASAC	G3PC70_GASAC	ENSGACP00000008986	ENSGACP00000015194	Cilia and flagella associated protein 45.	Uncharacterized protein.	0.880
G3NUG8_GASAC	G3PC74_GASAC	ENSGACP00000008986	ENSGACP00000015198	Cilia and flagella associated protein 45.	Uncharacterized protein.	0.880
G3NUG8_GASAC	G3PH97_GASAC	ENSGACP00000008986	ENSGACP00000016972	Cilia and flagella associated protein 45.	Ciliogenesis associated TTC17 interacting protein.	0.776
G3NUG8_GASAC	G3PN32_GASAC	ENSGACP00000008986	ENSGACP00000019015	Cilia and flagella associated protein 45.	WD repeat domain 78.	0.787
G3NUG8_GASAC	G3Q172_GASAC	ENSGACP00000008986	ENSGACP00000023620	Cilia and flagella associated protein 45.	WD_REPEATS_REGION domain-containing protein.	0.887
G3NUG8_GASAC	RSPH1	ENSGACP00000008986	ENSGACP00000002976	Cilia and flagella associated protein 45.	Radial spoke head component 1.	0.837