STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCV7_GASACZinc finger homeobox 4. (3565 aa)    
Predicted Functional Partners:
G3PH53_GASAC
Transforming growth factor beta; Belongs to the TGF-beta family.
    
  0.699
G3NWF7_GASAC
Runt-related transcription factor.
     
 0.690
G3PFC2_GASAC
Runt-related transcription factor.
     
 0.686
G3PRA9_GASAC
Runt-related transcription factor.
     
 0.686
G3PD31_GASAC
Runt domain-containing protein.
     
 0.665
G3PGZ3_GASAC
BEN domain containing 3.
    
  0.541
G3P517_GASAC
Bone morphogenetic protein 16.
    
 0.475
G3P7X5_GASAC
Bone morphogenetic protein 4.
    
 0.475
G3PFY2_GASAC
Bone morphogenetic protein 2b.
    
 0.475
G3N9M6_GASAC
Inhibin subunit beta B.
   
  0.473
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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