Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NCW8_GASACApolipoprotein A-IV a. (257 aa)    
Predicted Functional Partners:
G3NGN5_GASAC
Uncharacterized protein.
  
 
0.908
G3NCX3_GASAC
Apolipoprotein A-IV a.
  
  
 
0.901
G3P3D4_GASAC
Zgc:162608.
     
  0.900
G3NGT4_GASAC
Apolipoprotein C-II.
     
 0.661
G3NCX8_GASAC
Apolipoprotein Ea.
  
 
 
0.638
G3NGQ8_GASAC
Apolipoprotein Eb.
  
 
 
0.638
G3N4P3_GASAC
DUF1943 domain-containing protein.
   
 0.622
G3P546_GASAC
Apolipoprotein Bb, tandem duplicate 2.
   
 0.622
G3P570_GASAC
Vitellogenin domain-containing protein.
   
 0.622
G3NRQ2_GASAC
Apolipoprotein A-Ib.
  
0.616
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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