Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NCX0_GASACF-box and leucine-rich repeat protein 15. (292 aa)    
Predicted Functional Partners:
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
   
 0.991
G3QCJ8_GASAC
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.970
G3NLV9_GASAC
RBR-type E3 ubiquitin transferase.
    
   0.923
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.915
G3NCU2_GASAC
Cryptochrome circadian regulator 2.
    
 0.892
G3NH23_GASAC
Cryptochrome DASH.
    
 0.892
G3P8B1_GASAC
Cryptochrome circadian regulator 3a.
    
 0.892
G3PH24_GASAC
Si:ch1073-390k14.1.
    
 0.892
G3PJN7_GASAC
Cryptochrome circadian regulator 1b.
    
 0.892
G3PVR8_GASAC
Cryptochrome circadian regulator 5.
    
 0.892
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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