STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NCY1_GASACNuclear VCP like. (842 aa)    
Predicted Functional Partners:
G3PV23_GASAC
Mtr4 exosome RNA helicase.
   
 0.979
G3PK47_GASAC
UBX domain protein 7.
   
 0.976
G3PGG6_GASAC
RNA binding motif protein 28.
   
  
 0.948
G3Q071_GASAC
UBX domain protein 1.
    
 0.942
G3N731_GASAC
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
 0.928
G3NIJ4_GASAC
MI domain-containing protein.
   
    0.926
G3P5A7_GASAC
Uncharacterized protein.
    
 0.925
G3PN45_GASAC
NPL4 homolog, ubiquitin recognition factor.
    
 0.925
G3P7T7_GASAC
Nucleolar complex protein 3 homolog.
   
  
 0.920
G3NTL5_GASAC
Ribosome production factor 2 homolog.
   
 
 0.919
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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