STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3ND29_GASACZinc finger, SWIM-type containing 8. (1850 aa)    
Predicted Functional Partners:
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.765
G3NAC9_GASAC
Cullin 2; Belongs to the cullin family.
     
 0.735
ELOB
Elongin B.
    
 0.686
G3PK45_GASAC
Elongin B.
    
 0.686
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
     
 0.648
G3PF08_GASAC
Uncharacterized protein.
      
 0.591
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.483
G3PKP1_GASAC
Mitochondrial ribosomal protein S14.
      
 0.439
G3NXK2_GASAC
Ring finger protein 7.
     
 0.436
G3PK16_GASAC
Protein tyrosine phosphatase, non-receptor type 23, a.
   
   0.405
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.