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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3ND39_GASACUncharacterized protein; Belongs to the intermediate filament family. (644 aa)    
Predicted Functional Partners:
G3PZL5_GASAC
Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
    
 0.884
G3NWR8_GASAC
Granzyme 3, tandem duplicate 3; Belongs to the peptidase S1 family.
   
 0.854
G3NBQ0_GASAC
Lamin B2; Belongs to the intermediate filament family.
     
0.852
G3PIZ2_GASAC
Lamin A; Belongs to the intermediate filament family.
  
  
 
0.842
G3PEQ6_GASAC
Uncharacterized protein.
    
 0.836
G3QA89_GASAC
Barrier to autointegration factor 1.
    
 0.836
G3Q6G7_GASAC
LEM domain containing 3.
    
 0.818
G3PC00_GASAC
Sad1 and UNC84 domain containing 1.
    
 0.806
G3Q329_GASAC
Lamin B1; Belongs to the intermediate filament family.
     
0.802
G3NLK5_GASAC
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.800
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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