STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3ND43_GASACArmadillo repeat containing 3. (860 aa)    
Predicted Functional Partners:
G3NQN6_GASAC
EF-hand calcium binding domain 1.
   
 
 0.872
G3P322_GASAC
WD repeat domain 90.
    
   0.816
G3P1Z7_GASAC
Tetratricopeptide repeat domain 25.
   
 
 0.787
G3P1I4_GASAC
IQ motif and ubiquitin domain containing.
   
 
 0.786
G3NXE0_GASAC
Coiled-coil domain containing 114.
   
 
 0.785
G3NGA2_GASAC
Tektin 3.
   
 
 0.770
G3PKJ9_GASAC
RIB43A domain with coiled-coils 2.
   
 
 0.765
G3P244_GASAC
RIB43A domain with coiled-coils 1.
   
 
 0.753
G3ND32_GASAC
Tektin 2 (testicular).
   
 
 0.751
G3NNG0_GASAC
Uncharacterized protein.
   
 
 0.751
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.