STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3ND48_GASACSperm associated antigen 6. (508 aa)    
Predicted Functional Partners:
G3PPH5_GASAC
Karyopherin (importin) beta 1.
   
 0.914
G3N7I0_GASAC
CSE1 chromosome segregation 1-like (yeast).
   
 0.910
G3NUG8_GASAC
Cilia and flagella associated protein 45.
   
 
 0.795
G3PMV5_GASAC
F-box domain-containing protein.
   
   0.783
G3Q827_GASAC
Uncharacterized protein.
    
 
 0.768
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.753
G3NP66_GASAC
Nucleoporin 153.
    
 
 0.751
RANBP2
RAN binding protein 2.
   
 
 0.737
G3NRZ3_GASAC
Sperm flagellar 2.
   
 
 0.729
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 
 0.726
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.