Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3ND65_GASACCOMM domain containing 3. (193 aa)    
Predicted Functional Partners:
G3PPG2_GASAC
Uncharacterized protein.
   
 0.851
G3PDL6_GASAC
Lysine (K)-specific demethylase 2Ba.
   
 0.839
G3PVP3_GASAC
Lysine (K)-specific demethylase 2Aa.
   
 0.839
G3PY04_GASAC
Lysine (K)-specific demethylase 2Bb.
   
 0.839
G3Q0P5_GASAC
Lysine (K)-specific demethylase 2Ab.
   
 0.839
RING1
Ring finger protein 1.
    
 0.809
G3PNU5_GASAC
Ring finger protein 2.
    
 0.809
YAF2
YY1 associated factor 2.
    
 0.743
G3PDE5_GASAC
RING1 and YY1 binding protein b.
    
 0.743
G3Q4Y2_GASAC
YY1 associated factor 2.
    
 0.743
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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