Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3ND93_GASACH6 family homeobox 3. (295 aa)    
Predicted Functional Partners:
G3NGE9_GASAC
ISY1 splicing factor homolog.
    
   0.595
G3NPM7_GASAC
Protein phosphatase 1, regulatory subunit 21.
    
   0.595
G3Q5E2_GASAC
Regulatory factor X, 1b (influences HLA class II expression).
      
 0.589
G3PI38_GASAC
T-box transcription factor 1.
    
 
 0.562
G3P843_GASAC
Zgc:112083.
    
   0.539
G3QAR7_GASAC
Histone H4 transcription factor.
    
   0.539
G3NM49_GASAC
Notochord homeobox.
    
   0.500
G3NVT5_GASAC
Dystrobrevin.
    
   0.459
G3PBS9_GASAC
Dystrobrevin, beta b.
    
   0.459
G3Q1B5_GASAC
Dystrobrevin.
    
   0.459
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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