Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GANGigaxonin. (600 aa)    
Predicted Functional Partners:
G3P5E2_GASAC
Tubulin folding cofactor B.
    
 
 0.939
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.915
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.915
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.803
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
    
 0.770
G3Q4G0_GASAC
COMM domain containing 5.
     
  0.718
G3PIG8_GASAC
COMM domain containing 8.
    
  0.689
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
  0.689
G3NAT3_GASAC
COMM domain containing 6.
     
  0.688
G3NFG4_GASAC
Solute carrier family 38 member 8a.
      
 0.688
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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