Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NDD9_GASACMyosin VIIA and Rab interacting protein. (822 aa)    
Predicted Functional Partners:
G3P6M6_GASAC
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.635
G3PTJ3_GASAC
RAB27A, member RAS oncogene family.
     
 0.624
G3NPR0_GASAC
Myelin basic protein b.
   
  
 0.578
G3NPJ1_GASAC
Adherens junctions associated protein 1.
      
 0.546
G3PL27_GASAC
Uncharacterized protein.
     
 0.537
G3Q166_GASAC
RAB27B, member RAS oncogene family.
     
 0.537
G3N6U9_GASAC
Methyl CpG binding protein 2.
    
 0.473
G3NB62_GASAC
MBD domain-containing protein.
    
 0.473
G3PGX4_GASAC
Methyl-CpG binding domain protein 3a.
    
 0.473
G3PRD6_GASAC
Uncharacterized protein.
    
 0.473
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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