Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDF3_GASACF-box domain-containing protein. (535 aa)    
Predicted Functional Partners:
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
   
 0.963
G3QCJ8_GASAC
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.958
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.923
G3PAV6_GASAC
Fas (TNFRSF6) associated factor 1.
   
 
 0.916
G3P5A3_GASAC
Baculoviral IAP repeat containing 5a.
    
 
 0.851
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.766
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.766
G3NUN6_GASAC
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
   
  
 0.757
G3P2K3_GASAC
Baculoviral IAP repeat containing 5b.
    
 
 0.756
G3NLL2_GASAC
F-box protein 16.
   
 0.747
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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