STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDF9_GASACYbeY metalloendoribonuclease. (165 aa)    
Predicted Functional Partners:
G3P2V9_GASAC
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.973
G3PM62_GASAC
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.946
G3NFX5_GASAC
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.942
G3PDM5_GASAC
Death associated protein 3.
    
   0.942
G3Q8C6_GASAC
Uncharacterized protein.
  
 
 0.938
G3QA42_GASAC
Era-like 12S mitochondrial rRNA chaperone 1.
  
  
 0.935
G3NGX6_GASAC
Mitochondrial ribosomal protein L43.
   
   0.914
G3P6H3_GASAC
Mitochondrial ribosomal protein L47.
    
   0.914
G3PPJ5_GASAC
Mitochondrial ribosomal protein L46.
    
   0.914
G3NMR4_GASAC
Si:dkey-165n16.1.
  
   0.906
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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