Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDG3_GASACPlectin a. (4391 aa)    
Predicted Functional Partners:
G3NPF7_GASAC
Uncharacterized protein.
 
      0.879
G3NMX5_GASAC
Integrin beta.
  
 0.872
G3N550_GASAC
Uncharacterized protein.
   
 0.837
G3Q2Y3_GASAC
Junction plakoglobin a.
   
 0.837
G3PII0_GASAC
Desmocollin 2 like.
   
 0.813
G3Q393_GASAC
Spectrin alpha, non-erythrocytic 1.
   
 0.794
G3Q4Q7_GASAC
Plakophilin 2.
   
 0.707
G3NRF1_GASAC
Uncharacterized protein.
   
 0.693
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
   
 0.693
G3NN56_GASAC
Plakophilin 1b.
   
 0.688
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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