Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDG8_GASACAAR2 splicing factor. (379 aa)    
Predicted Functional Partners:
G3P3L5_GASAC
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.992
G3P9A8_GASAC
Zinc finger, HIT-type containing 2.
   
 
 0.990
G3PC73_GASAC
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.989
G3P105_GASAC
Pre-mRNA processing factor 8.
    
 
 0.988
G3PM12_GASAC
Uncharacterized protein.
    
 
 0.987
G3NF69_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.
    
 
 0.985
G3P7G7_GASAC
Ecdysoneless homolog (Drosophila).
    
 
 0.983
G3PSY2_GASAC
E2f-associated phosphoprotein.
    
 
 0.982
G3NQ98_GASAC
Small nuclear ribonucleoprotein 40 (U5).
    
 
 0.980
G3PK84_GASAC
CD2 (cytoplasmic tail) binding protein 2.
   
 
 0.970
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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