STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDG8_GASACAAR2 splicing factor. (379 aa)    
Predicted Functional Partners:
G3P105_GASAC
Pre-mRNA processing factor 8.
   
 
 0.995
G3P3L5_GASAC
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.967
G3P7G7_GASAC
Ecdysoneless homolog (Drosophila).
    
 
 0.949
G3PC73_GASAC
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.948
G3PM12_GASAC
Uncharacterized protein.
    
 
 0.933
G3PK84_GASAC
CD2 (cytoplasmic tail) binding protein 2.
   
 
 0.910
G3NF69_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.
    
 
 0.898
G3PSY2_GASAC
E2f-associated phosphoprotein.
    
 
 0.865
GFM1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
    
 
 0.824
G3P9A8_GASAC
Zinc finger, HIT-type containing 2.
    
 
 0.812
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.