Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PROP1PROP paired-like homeobox 1. (174 aa)    
Predicted Functional Partners:
G3NU69_GASAC
POU domain protein.
    
 0.911
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.731
G3P9T3_GASAC
LIM homeobox 4.
    
 0.716
LHX3
LIM homeobox 3.
    
 0.716
G3PC60_GASAC
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
      
 0.693
POMC
Proopiomelanocortin a.
   
  
 0.643
G3ND43_GASAC
Armadillo repeat containing 3.
    
 
 0.626
G3NTQ3_GASAC
Prolactin.
      
 0.614
G3Q6K7_GASAC
Prolactin 2.
      
 0.614
G3P0F2_GASAC
AT rich interactive domain 3A (BRIGHT-like).
    
 
 0.594
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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