STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDK2_GASACATP-dependent DNA helicase; Belongs to the helicase family. (2173 aa)    
Predicted Functional Partners:
G3NQJ7_GASAC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.771
G3P4E5_GASAC
Uncharacterized protein.
   
 
 0.758
G3PUG9_GASAC
DNA replication helicase/nuclease 2.
    
 
 0.703
G3Q939_GASAC
Origin recognition complex, subunit 5.
    
 
 0.695
G3P3R5_GASAC
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.692
G3N487_GASAC
Replication protein A3.
    
 
 0.684
G3Q642_GASAC
F-box DNA helicase 1.
  
 
 0.675
G3PEE9_GASAC
RAD52 homolog, DNA repair protein.
    
 
 0.648
G3QBX6_GASAC
RAD50 homolog, double strand break repair protein.
   
 
 0.631
G3P9V9_GASAC
BLM RecQ like helicase.
  
 
 0.624
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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